analysis Package
================

:mod:`correctRMSD` Module
-------------------------

.. automodule:: AdaptivePELE.analysis.correctRMSD
    :members:
    :undoc-members:
    :show-inheritance:

:mod:`foldersFirstBindingEvent` Module
--------------------------------------

.. automodule:: AdaptivePELE.analysis.foldersFirstBindingEvent
    :members:
    :undoc-members:
    :show-inheritance:

:mod:`makePNGs` Module
----------------------

.. automodule:: AdaptivePELE.analysis.makePNGs
    :members:
    :undoc-members:
    :show-inheritance:

:mod:`numberOfClusters` Module
---------------------------------

.. automodule:: AdaptivePELE.analysis.numberOfClusters
    :members:
    :undoc-members:
    :show-inheritance:

:mod:`plotAdaptive` Module
--------------------------

.. automodule:: AdaptivePELE.analysis.plotAdaptive
    :members:
    :undoc-members:
    :show-inheritance:

:mod:`writeClusteringStructures` Module
---------------------------------------

.. automodule:: AdaptivePELE.analysis.writeClusteringStructures
    :members:
    :undoc-members:
    :show-inheritance:

:mod:`backtrackAdaptiveTrajectory` Module
-----------------------------------------

.. automodule:: AdaptivePELE.analysis.backtrackAdaptiveTrajectory
    :members:
    :undoc-members:
    :show-inheritance:
 
.. toctree::