Python Module Index

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	`AdaptivePELE`
	`AdaptivePELE.__init__`
	`AdaptivePELE.adaptiveSampling`
	`AdaptivePELE.analysis.backtrackAdaptiveTrajectory`
	`AdaptivePELE.analysis.correctRMSD`
	`AdaptivePELE.analysis.foldersFirstBindingEvent`
	`AdaptivePELE.analysis.makePNGs`
	`AdaptivePELE.analysis.numberOfClusters`
	`AdaptivePELE.analysis.plotAdaptive`
	`AdaptivePELE.analysis.writeClusteringStructures`
	`AdaptivePELE.atomset.atomset`
	`AdaptivePELE.atomset.RMSDCalculator`
	`AdaptivePELE.atomset.SymmetryContactMapEvaluator`
	`AdaptivePELE.automateRoundsAdaptive`
	`AdaptivePELE.clustering.clustering`
	`AdaptivePELE.clustering.clusteringTypes`
	`AdaptivePELE.clustering.thresholdcalculator`
	`AdaptivePELE.clustering.thresholdcalculatortypes`
	`AdaptivePELE.simulation.simulationrunner`
	`AdaptivePELE.simulation.simulationTypes`
	`AdaptivePELE.spawning.densitycalculator`
	`AdaptivePELE.spawning.densitycalculatortypes`
	`AdaptivePELE.spawning.spawning`
	`AdaptivePELE.spawning.spawningTypes`
	`AdaptivePELE.utilities.clusteringUtilities`
	`AdaptivePELE.utilities.utilities`
	`AdaptivePELE.validator.controlFileValidator`